Gene Family Search Results

Glycoside Hydrolase family 9 Populus genes with significant expression differentials

Class

Gene

Protein name

Sig. tests

Genbank ID

UniProt ID

Amino acid composition table

GH9

POPTR_0004s16900 (EnsemblPlants link)

Endoglucanase (EC 3.2.1.4)

AEO97225.1(NCBI query)

K4EKR4(UniProtKB link)

Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0004s16900

Endoglucanase (EC 3.2.1.4)

WT-C
n =	3
Minimum	7.32
Maximum	9.24
Median	8.24
Mean	8.27
Variance	0.92
Std. Dev.	0.96
Quartiles
0.25	7.32
0.50	8.24
0.75	9.24

WT-T
n =	3
Minimum	7.77
Maximum	12.53
Median	8.23
Mean	9.51
Variance	6.89
Std. Dev.	2.63
Quartiles
0.25	7.77
0.50	8.23
0.75	12.53

1-C
n =	3
Minimum	6.92
Maximum	11.14
Median	9.25
Mean	9.10
Variance	4.47
Std. Dev.	2.11
Quartiles
0.25	6.92
0.50	9.25
0.75	11.14

1-T
n =	3
Minimum	4.95
Maximum	8.65
Median	5.89
Mean	6.50
Variance	3.70
Std. Dev.	1.92
Quartiles
0.25	4.95
0.50	5.89
0.75	8.65

165-C
n =	3
Minimum	2.98
Maximum	5.56
Median	3.14
Mean	3.89
Variance	2.09
Std. Dev.	1.45
Quartiles
0.25	2.98
0.50	3.14
0.75	5.56

165-T
n =	3
Minimum	0.00
Maximum	4.09
Median	3.48
Mean	2.52
Variance	4.87
Std. Dev.	2.21
Quartiles
0.25	0.00
0.50	3.48
0.75	4.09

167-C
n =	3
Minimum	2.40
Maximum	6.51
Median	3.92
Mean	4.28
Variance	4.32
Std. Dev.	2.08
Quartiles
0.25	2.40
0.50	3.92
0.75	6.51

167-T
n =	3
Minimum	3.94
Maximum	7.41
Median	4.37
Mean	5.24
Variance	3.58
Std. Dev.	1.89
Quartiles
0.25	3.94
0.50	4.37
0.75	7.41

Class

Gene

Protein name

Sig. tests

Genbank ID

UniProt ID

Amino acid composition table

GH9

POPTR_0014s12170 (EnsemblPlants link)

Endoglucanase (EC 3.2.1.4)

AEO97226.1(NCBI query)

B9I9P6(UniProtKB link)

Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0014s12170

Endoglucanase (EC 3.2.1.4)

WT-C
n =	3
Minimum	39.62
Maximum	84.52
Median	82.33
Mean	68.82
Variance	640.83
Std. Dev.	25.31
Quartiles
0.25	39.62
0.50	82.33
0.75	84.52

WT-T
n =	3
Minimum	26.45
Maximum	59.52
Median	33.36
Mean	39.78
Variance	304.29
Std. Dev.	17.44
Quartiles
0.25	26.45
0.50	33.36
0.75	59.52

1-C
n =	3
Minimum	20.94
Maximum	40.22
Median	38.97
Mean	33.38
Variance	116.39
Std. Dev.	10.79
Quartiles
0.25	20.94
0.50	38.97
0.75	40.22

1-T
n =	3
Minimum	24.91
Maximum	43.32
Median	42.71
Mean	36.98
Variance	109.36
Std. Dev.	10.46
Quartiles
0.25	24.91
0.50	42.71
0.75	43.32

165-C
n =	3
Minimum	3.75
Maximum	9.25
Median	7.68
Mean	6.89
Variance	8.03
Std. Dev.	2.83
Quartiles
0.25	3.75
0.50	7.68
0.75	9.25

165-T
n =	3
Minimum	9.66
Maximum	18.99
Median	10.35
Mean	13.00
Variance	27.03
Std. Dev.	5.20
Quartiles
0.25	9.66
0.50	10.35
0.75	18.99

167-C
n =	3
Minimum	7.19
Maximum	14.01
Median	9.90
Mean	10.37
Variance	11.79
Std. Dev.	3.43
Quartiles
0.25	7.19
0.50	9.90
0.75	14.01

167-T
n =	3
Minimum	11.96
Maximum	32.64
Median	16.73
Mean	20.44
Variance	117.26
Std. Dev.	10.83
Quartiles
0.25	11.96
0.50	16.73
0.75	32.64

Class

Gene

Protein name

Sig. tests

Genbank ID

UniProt ID

Amino acid composition table

GH9

POPTR_0015s14720 (EnsemblPlants link)

Endoglucanase (EC 3.2.1.4)

AEO97222.1(NCBI query)

B9ICT3(UniProtKB link)

Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0015s14720

Endoglucanase (EC 3.2.1.4)

WT-C
n =	3
Minimum	0.13
Maximum	0.54
Median	0.25
Mean	0.31
Variance	0.04
Std. Dev.	0.21
Quartiles
0.25	0.13
0.50	0.25
0.75	0.54

WT-T
n =	3
Minimum	0.27
Maximum	0.35
Median	0.31
Mean	0.31
Variance	0.00
Std. Dev.	0.04
Quartiles
0.25	0.27
0.50	0.31
0.75	0.35

1-C
n =	3
Minimum	0.58
Maximum	2.97
Median	0.87
Mean	1.47
Variance	1.70
Std. Dev.	1.30
Quartiles
0.25	0.58
0.50	0.87
0.75	2.97

1-T
n =	3
Minimum	0.38
Maximum	0.77
Median	0.43
Mean	0.53
Variance	0.05
Std. Dev.	0.21
Quartiles
0.25	0.38
0.50	0.43
0.75	0.77

165-C
n =	3
Minimum	0.82
Maximum	1.23
Median	0.92
Mean	0.99
Variance	0.05
Std. Dev.	0.21
Quartiles
0.25	0.82
0.50	0.92
0.75	1.23

165-T
n =	3
Minimum	0.00
Maximum	0.49
Median	0.25
Mean	0.25
Variance	0.06
Std. Dev.	0.25
Quartiles
0.25	0.00
0.50	0.25
0.75	0.49

167-C
n =	3
Minimum	0.65
Maximum	1.23
Median	0.73
Mean	0.87
Variance	0.10
Std. Dev.	0.31
Quartiles
0.25	0.65
0.50	0.73
0.75	1.23

167-T
n =	3
Minimum	0.81
Maximum	1.02
Median	0.85
Mean	0.89
Variance	0.01
Std. Dev.	0.11
Quartiles
0.25	0.81
0.50	0.85
0.75	1.02

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