Populus genes in RNA-seq libraries




ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0001s04820 (EnsemblPlants link)class III peroxidase (Prx2) Populus trichocarpa AHL39106.1 (NCBI query)W8PVP9(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0001s04820


class III peroxidase (Prx2)
WT-C
n =
3
Minimum 0.68
Maximum 2.72
Median 2.38
Mean 1.93
Variance 1.19
Std. Dev. 1.09
Quartiles
0.25 0.68
0.50 2.38
0.75 2.72
WT-T
n =
3
Minimum 2.73
Maximum 3.05
Median 2.80
Mean 2.86
Variance 0.03
Std. Dev. 0.17
Quartiles
0.25 2.73
0.50 2.80
0.75 3.05
1-C
n =
3
Minimum 1.33
Maximum 3.88
Median 3.22
Mean 2.81
Variance 1.75
Std. Dev. 1.32
Quartiles
0.25 1.33
0.50 3.22
0.75 3.88
1-T
n =
3
Minimum 2.97
Maximum 6.34
Median 4.57
Mean 4.63
Variance 2.84
Std. Dev. 1.69
Quartiles
0.25 2.97
0.50 4.57
0.75 6.34
165-C
n =
3
Minimum 2.51
Maximum 4.46
Median 3.58
Mean 3.52
Variance 0.95
Std. Dev. 0.98
Quartiles
0.25 2.51
0.50 3.58
0.75 4.46
165-T
n =
3
Minimum 4.38
Maximum 5.47
Median 5.35
Mean 5.07
Variance 0.36
Std. Dev. 0.60
Quartiles
0.25 4.38
0.50 5.35
0.75 5.47
167-C
n =
3
Minimum 3.11
Maximum 3.75
Median 3.30
Mean 3.39
Variance 0.11
Std. Dev. 0.33
Quartiles
0.25 3.11
0.50 3.30
0.75 3.75
167-T
n =
3
Minimum 4.30
Maximum 6.11
Median 5.46
Mean 5.29
Variance 0.84
Std. Dev. 0.92
Quartiles
0.25 4.30
0.50 5.46
0.75 6.11

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0001s04840 (EnsemblPlants link)class III peroxidase (Prx3) Populus trichocarpa AHL39107.1 (NCBI query)B9GLK7(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0001s04840


class III peroxidase (Prx3)
WT-C
n =
3
Minimum 1.09
Maximum 1.59
Median 1.52
Mean 1.40
Variance 0.07
Std. Dev. 0.27
Quartiles
0.25 1.09
0.50 1.52
0.75 1.59
WT-T
n =
3
Minimum 1.90
Maximum 3.54
Median 2.03
Mean 2.49
Variance 0.83
Std. Dev. 0.91
Quartiles
0.25 1.90
0.50 2.03
0.75 3.54
1-C
n =
3
Minimum 0.00
Maximum 1.62
Median 0.15
Mean 0.59
Variance 0.80
Std. Dev. 0.90
Quartiles
0.25 0.00
0.50 0.15
0.75 1.62
1-T
n =
3
Minimum 2.18
Maximum 5.19
Median 2.92
Mean 3.43
Variance 2.46
Std. Dev. 1.57
Quartiles
0.25 2.18
0.50 2.92
0.75 5.19
165-C
n =
3
Minimum 1.12
Maximum 2.08
Median 1.99
Mean 1.73
Variance 0.28
Std. Dev. 0.53
Quartiles
0.25 1.12
0.50 1.99
0.75 2.08
165-T
n =
3
Minimum 0.00
Maximum 2.70
Median 2.00
Mean 1.57
Variance 1.96
Std. Dev. 1.40
Quartiles
0.25 0.00
0.50 2.00
0.75 2.70
167-C
n =
3
Minimum 1.74
Maximum 2.67
Median 2.16
Mean 2.19
Variance 0.22
Std. Dev. 0.47
Quartiles
0.25 1.74
0.50 2.16
0.75 2.67
167-T
n =
3
Minimum 2.20
Maximum 3.88
Median 3.30
Mean 3.13
Variance 0.73
Std. Dev. 0.85
Quartiles
0.25 2.20
0.50 3.30
0.75 3.88

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0001s04870 (EnsemblPlants link)class III peroxidase (Prx6) Populus trichocarpa AHL39110.1 (NCBI query)B9GLL0(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0001s04870


class III peroxidase (Prx6)
WT-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
WT-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-T
n =
3
Minimum 0.00
Maximum 0.11
Median 0.09
Mean 0.07
Variance 0.00
Std. Dev. 0.06
Quartiles
0.25 0.00
0.50 0.09
0.75 0.11
165-C
n =
3
Minimum 0.00
Maximum 0.17
Median 0.00
Mean 0.06
Variance 0.01
Std. Dev. 0.10
Quartiles
0.25 0.00
0.50 0.00
0.75 0.17
165-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-C
n =
3
Minimum 0.00
Maximum 0.21
Median 0.00
Mean 0.07
Variance 0.01
Std. Dev. 0.12
Quartiles
0.25 0.00
0.50 0.00
0.75 0.21
167-T
n =
3
Minimum 0.06
Maximum 0.23
Median 0.17
Mean 0.15
Variance 0.01
Std. Dev. 0.09
Quartiles
0.25 0.06
0.50 0.17
0.75 0.23

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0001s46290 (EnsemblPlants link)class III peroxidase (Prx13) Populus trichocarpa AHL39117.1 (NCBI query)B9GK06(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0001s46290


class III peroxidase (Prx13)
WT-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
WT-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0001s46310 (EnsemblPlants link)class III peroxidase (Prx14) Populus trichocarpa AHL39118.1 (NCBI query)U5GUV9(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0001s46310


class III peroxidase (Prx14)
WT-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
WT-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0003s21610 (EnsemblPlants link)class III peroxidase (Prx21) Populus trichocarpa AHL39125.1 (NCBI query)W8PWD6(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0003s21610


class III peroxidase (Prx21)
WT-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
WT-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-T
n =
3
Minimum 0.00
Maximum 0.12
Median 0.00
Mean 0.04
Variance 0.00
Std. Dev. 0.07
Quartiles
0.25 0.00
0.50 0.00
0.75 0.12
167-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0004s05140 (EnsemblPlants link)class III peroxidase (Prx28) Populus trichocarpa AHL39132.1 (NCBI query)B9H2M7(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0004s05140


class III peroxidase (Prx28)
WT-C
n =
3
Minimum 5.41
Maximum 7.50
Median 6.79
Mean 6.57
Variance 1.13
Std. Dev. 1.06
Quartiles
0.25 5.41
0.50 6.79
0.75 7.50
WT-T
n =
3
Minimum 5.56
Maximum 7.89
Median 6.04
Mean 6.50
Variance 1.51
Std. Dev. 1.23
Quartiles
0.25 5.56
0.50 6.04
0.75 7.89
1-C
n =
3
Minimum 6.41
Maximum 14.27
Median 8.45
Mean 9.71
Variance 16.64
Std. Dev. 4.08
Quartiles
0.25 6.41
0.50 8.45
0.75 14.27
1-T
n =
3
Minimum 2.10
Maximum 4.90
Median 3.92
Mean 3.64
Variance 2.02
Std. Dev. 1.42
Quartiles
0.25 2.10
0.50 3.92
0.75 4.90
165-C
n =
3
Minimum 1.78
Maximum 4.74
Median 3.54
Mean 3.35
Variance 2.22
Std. Dev. 1.49
Quartiles
0.25 1.78
0.50 3.54
0.75 4.74
165-T
n =
3
Minimum 0.44
Maximum 4.79
Median 1.92
Mean 2.38
Variance 4.89
Std. Dev. 2.21
Quartiles
0.25 0.44
0.50 1.92
0.75 4.79
167-C
n =
3
Minimum 3.12
Maximum 3.59
Median 3.50
Mean 3.40
Variance 0.06
Std. Dev. 0.25
Quartiles
0.25 3.12
0.50 3.50
0.75 3.59
167-T
n =
3
Minimum 1.05
Maximum 3.87
Median 1.75
Mean 2.22
Variance 2.16
Std. Dev. 1.47
Quartiles
0.25 1.05
0.50 1.75
0.75 3.87

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0006s28320 (EnsemblPlants link)class III peroxidase (Prx42) Populus trichocarpa AHL39146.1 (NCBI query)W8PVT6(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0006s28320


class III peroxidase (Prx42)
WT-C
n =
3
Minimum 0.14
Maximum 0.43
Median 0.34
Mean 0.30
Variance 0.02
Std. Dev. 0.15
Quartiles
0.25 0.14
0.50 0.34
0.75 0.43
WT-T
n =
3
Minimum 0.20
Maximum 0.35
Median 0.34
Mean 0.30
Variance 0.01
Std. Dev. 0.08
Quartiles
0.25 0.20
0.50 0.34
0.75 0.35
1-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-T
n =
3
Minimum 0.16
Maximum 1.18
Median 0.44
Mean 0.59
Variance 0.28
Std. Dev. 0.53
Quartiles
0.25 0.16
0.50 0.44
0.75 1.18
165-C
n =
3
Minimum 0.00
Maximum 0.34
Median 0.00
Mean 0.11
Variance 0.04
Std. Dev. 0.20
Quartiles
0.25 0.00
0.50 0.00
0.75 0.34
165-T
n =
3
Minimum 0.00
Maximum 0.26
Median 0.00
Mean 0.09
Variance 0.02
Std. Dev. 0.15
Quartiles
0.25 0.00
0.50 0.00
0.75 0.26
167-C
n =
3
Minimum 0.11
Maximum 0.43
Median 0.12
Mean 0.22
Variance 0.03
Std. Dev. 0.18
Quartiles
0.25 0.11
0.50 0.12
0.75 0.43
167-T
n =
3
Minimum 0.53
Maximum 1.14
Median 1.11
Mean 0.93
Variance 0.12
Std. Dev. 0.34
Quartiles
0.25 0.53
0.50 1.11
0.75 1.14

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0008s02340 (EnsemblPlants link)class III peroxidase (Prx54) Populus trichocarpa AHL39158.1 (NCBI query)W8Q7U8(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0008s02340


class III peroxidase (Prx54)
WT-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
WT-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-C
n =
3
Minimum 0.00
Maximum 0.19
Median 0.00
Mean 0.06
Variance 0.01
Std. Dev. 0.11
Quartiles
0.25 0.00
0.50 0.00
0.75 0.19
165-T
n =
3
Minimum 0.00
Maximum 0.28
Median 0.00
Mean 0.09
Variance 0.03
Std. Dev. 0.16
Quartiles
0.25 0.00
0.50 0.00
0.75 0.28
167-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0013s15240 (EnsemblPlants link)class III peroxidase (Prx73) Populus trichocarpa AHL39177.1 (NCBI query)B9I6X1(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0013s15240


class III peroxidase (Prx73)
WT-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
WT-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
1-T
n =
3
Minimum 0.00
Maximum 0.11
Median 0.00
Mean 0.04
Variance 0.00
Std. Dev. 0.06
Quartiles
0.25 0.00
0.50 0.00
0.75 0.11
165-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
165-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-C
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00
167-T
n =
3
Minimum 0.00
Maximum 0.00
Median 0.00
Mean 0.00
Variance 0.00
Std. Dev. 0.00
Quartiles
0.25 0.00
0.50 0.00
0.75 0.00

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0014s14000 (EnsemblPlants link)class III peroxidase (Prx77) Populus trichocarpa AHL39181.1 (NCBI query)B9IA56(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0014s14000


class III peroxidase (Prx77)
WT-C
n =
3
Minimum 0.14
Maximum 0.82
Median 0.52
Mean 0.49
Variance 0.12
Std. Dev. 0.34
Quartiles
0.25 0.14
0.50 0.52
0.75 0.82
WT-T
n =
3
Minimum 0.39
Maximum 1.21
Median 0.85
Mean 0.82
Variance 0.17
Std. Dev. 0.41
Quartiles
0.25 0.39
0.50 0.85
0.75 1.21
1-C
n =
3
Minimum 3.47
Maximum 6.23
Median 3.83
Mean 4.51
Variance 2.25
Std. Dev. 1.50
Quartiles
0.25 3.47
0.50 3.83
0.75 6.23
1-T
n =
3
Minimum 12.52
Maximum 29.61
Median 27.63
Mean 23.25
Variance 87.38
Std. Dev. 9.35
Quartiles
0.25 12.52
0.50 27.63
0.75 29.61
165-C
n =
3
Minimum 25.46
Maximum 50.82
Median 43.77
Mean 40.02
Variance 171.35
Std. Dev. 13.09
Quartiles
0.25 25.46
0.50 43.77
0.75 50.82
165-T
n =
3
Minimum 15.52
Maximum 31.37
Median 16.51
Mean 21.13
Variance 78.84
Std. Dev. 8.88
Quartiles
0.25 15.52
0.50 16.51
0.75 31.37
167-C
n =
3
Minimum 21.23
Maximum 47.59
Median 27.57
Mean 32.13
Variance 189.31
Std. Dev. 13.76
Quartiles
0.25 21.23
0.50 27.57
0.75 47.59
167-T
n =
3
Minimum 7.84
Maximum 29.36
Median 10.16
Mean 15.79
Variance 139.52
Std. Dev. 11.81
Quartiles
0.25 7.84
0.50 10.16
0.75 29.36

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0016s14030 (EnsemblPlants link)class III peroxidase (Prx83) Populus trichocarpa AHL39187.1 (NCBI query)B9IGP7(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0016s14030


class III peroxidase (Prx83)
WT-C
n =
3
Minimum 1.23
Maximum 2.15
Median 1.57
Mean 1.65
Variance 0.22
Std. Dev. 0.47
Quartiles
0.25 1.23
0.50 1.57
0.75 2.15
WT-T
n =
3
Minimum 1.90
Maximum 2.75
Median 1.95
Mean 2.20
Variance 0.23
Std. Dev. 0.48
Quartiles
0.25 1.90
0.50 1.95
0.75 2.75
1-C
n =
3
Minimum 1.37
Maximum 3.50
Median 1.71
Mean 2.19
Variance 1.31
Std. Dev. 1.14
Quartiles
0.25 1.37
0.50 1.71
0.75 3.50
1-T
n =
3
Minimum 4.04
Maximum 5.65
Median 4.92
Mean 4.87
Variance 0.65
Std. Dev. 0.81
Quartiles
0.25 4.04
0.50 4.92
0.75 5.65
165-C
n =
3
Minimum 3.54
Maximum 6.28
Median 3.88
Mean 4.57
Variance 2.23
Std. Dev. 1.49
Quartiles
0.25 3.54
0.50 3.88
0.75 6.28
165-T
n =
3
Minimum 4.82
Maximum 9.29
Median 4.99
Mean 6.37
Variance 6.42
Std. Dev. 2.53
Quartiles
0.25 4.82
0.50 4.99
0.75 9.29
167-C
n =
3
Minimum 4.25
Maximum 8.64
Median 6.11
Mean 6.33
Variance 4.86
Std. Dev. 2.20
Quartiles
0.25 4.25
0.50 6.11
0.75 8.64
167-T
n =
3
Minimum 6.63
Maximum 15.87
Median 8.50
Mean 10.33
Variance 23.87
Std. Dev. 4.89
Quartiles
0.25 6.63
0.50 8.50
0.75 15.87

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
AA0POPTR_0018s02910 (EnsemblPlants link)class III peroxidase (Prx89) Populus trichocarpa AHL39193.1 (NCBI query)B9IL94(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)

Normalized RNA-seq library counts for POPTR_0018s02910


class III peroxidase (Prx89)
WT-C
n =
3
Minimum 0.89
Maximum 1.32
Median 1.21
Mean 1.14
Variance 0.05
Std. Dev. 0.22
Quartiles
0.25 0.89
0.50 1.21
0.75 1.32
WT-T
n =
3
Minimum 1.67
Maximum 2.28
Median 1.97
Mean 1.97
Variance 0.09
Std. Dev. 0.31
Quartiles
0.25 1.67
0.50 1.97
0.75 2.28
1-C
n =
3
Minimum 0.49
Maximum 2.23
Median 1.15
Mean 1.29
Variance 0.77
Std. Dev. 0.88
Quartiles
0.25 0.49
0.50 1.15
0.75 2.23
1-T
n =
3
Minimum 1.83
Maximum 2.99
Median 2.77
Mean 2.53
Variance 0.38
Std. Dev. 0.62
Quartiles
0.25 1.83
0.50 2.77
0.75 2.99
165-C
n =
3
Minimum 1.39
Maximum 1.55
Median 1.48
Mean 1.47
Variance 0.01
Std. Dev. 0.08
Quartiles
0.25 1.39
0.50 1.48
0.75 1.55
165-T
n =
3
Minimum 0.00
Maximum 1.39
Median 1.11
Mean 0.83
Variance 0.54
Std. Dev. 0.74
Quartiles
0.25 0.00
0.50 1.11
0.75 1.39
167-C
n =
3
Minimum 0.94
Maximum 1.56
Median 1.11
Mean 1.20
Variance 0.10
Std. Dev. 0.32
Quartiles
0.25 0.94
0.50 1.11
0.75 1.56
167-T
n =
3
Minimum 2.65
Maximum 3.68
Median 3.09
Mean 3.14
Variance 0.27
Std. Dev. 0.52
Quartiles
0.25 2.65
0.50 3.09
0.75 3.68

 


 
Return to the carbohydrate-active gene family search page.