Populus genes in RNA-seq libraries




ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CBM48POPTR_0005s27240 (EnsemblPlants link)starch branching enzyme I Populus trichocarpa ABN05321.1 (NCBI query)A2TIS0(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0005s27240; this starch branching enzyme I transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CBM48POPTR_0006s11620 (EnsemblPlants link)starch branching enzyme II Populus trichocarpa ABN05322.1 (NCBI query)A2TIS1(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0006s11620; this starch branching enzyme II transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CBM48POPTR_0001s36980 (EnsemblPlants link)starch branching enzyme Populus trichocarpa ABN05323.1 (NCBI query)A2TIS2(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0001s36980; this starch branching enzyme transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CBM48POPTR_0001s36980 (EnsemblPlants link)starch branching enzyme Populus trichocarpa ABN05323.1 (NCBI query)A2TIS2(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0001s36980; this starch branching enzyme transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CBM48POPTR_0005s14520 (EnsemblPlants link)unknown (WS0118_P17) Populus trichocarpa ABK94604.1 (NCBI query)A9PE01(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0005s14520; this unknown (WS0118_P17) transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

 


 
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