Populus genes in RNA-seq libraries




ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CE13POPTR_0004s24210 (EnsemblPlants link)pectin acetylesterase (Pae1;PAE1;CE13_5) Populus trichocarpa ADR82372.1 (NCBI query)G3DQ81(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0004s24210; this pectin acetylesterase (Pae1;PAE1;CE13_5) transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CE13POPTR_0003s03720 (EnsemblPlants link)unknown (WS0112_D10) Populus trichocarpa ABK93778.1 (NCBI query)A9PBM5 (UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0003s03720; this unknown (WS0112_D10) transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

ClassGeneProtein nameOrganismGenbank IDUniProt IDAmino acid composition table
CE13POPTR_0003s03720 (EnsemblPlants link)unknown (WS01231_I23) Populus trichocarpa ABK95483.1 (NCBI query)A9PBM5(UniProtKB link)Amino Acid Composition(ExPASy link)
Protein sequence(FASTA)
No RNA-seq library record found for POPTR_0003s03720; this unknown (WS01231_I23) transcript may have been excluded from differential analysis due to mapping non-uniquely to the P. trichocarpa reference (this prevents inflation of transcript counts). This can occur in families with very high (>99%) homology.

 


 
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